@RehabMan, thank you for taking the time to help on this.
I uninstalled virtual box and tried to sleep/resume a couple of times, unfortunately, it is still happening. I've attached new ioreg dumps here.
BTW, I realised I forgot to include system.log in previous post, here's what I see relating to bluetooth, these messages are there every wake, not sure if it has any relation with the issue I'm facing...
Code:
Aug 3 10:03:35 makrolon CommCenter[315]: Telling CSI to exit low power.
Aug 3 10:03:35 makrolon kernel[0]: Sandbox: mDNSResponder(89) deny(1) mach-lookup com.apple.distributed_notifications@1v3
Aug 3 10:03:35 makrolon kernel[0]: Setting BTCoex Config: enable_2G:1, profile_2g:0, enable_5G:1, profile_5G:0
Aug 3 10:03:35 makrolon kernel[0]: en1: channel changed to 1
Aug 3 10:03:35 makrolon kernel[0]: in6_unlink_ifa: IPv6 address 0xe15f8228080a9073 has no prefix
Aug 3 10:03:35 makrolon kernel[0]: AirPort: Link Up on awdl0
Aug 3 10:03:35 makrolon ntpd[195]: drift PPM:0.000 -> -19.673
Aug 3 10:03:35 makrolon UserEventAgent[41]: Captive: CNPluginHandler en1: Inactive
Aug 3 10:03:35 makrolon symptomsd[207]: -[NetworkAnalyticsEngine _writeJournalRecord:fromCellFingerprint:key:atLOI:ofKind:lqm:isFaulty:] Hashing of the primary key failed. Dropping the journal record.
Aug 3 10:03:35 makrolon configd[49]: network changed: v4(en1-:192.168.16.240) DNS- Proxy-
Aug 3 10:03:35 makrolon kernel[0]: Setting BTCoex Config: enable_2G:1, profile_2g:0, enable_5G:1, profile_5G:0
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][StartBulkPipeRead] -- mInt0BulkInPipe->clearStall (true) failed with error 0xE00002ED (kIOReturnNotResponding) -- 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][StartInterruptPipeRead] -- mInt0InterruptPipe->clearStall (true) failed with error 0xE00002ED (kIOReturnNotResponding) -- 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][StartBulkPipeRead] -- mInt0BulkInPipe->clearStall (true) failed with error 0xE00002ED (kIOReturnNotResponding) -- 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][StartInterruptPipeRead] -- mInt0InterruptPipe->clearStall (true) failed with error 0xE00002ED (kIOReturnNotResponding) -- 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: [IOBluetoothHostControllerUSBTransport][SetRemoteWakeUp] -- deviceRequest() failed: 0xE00002ED (kIOReturnNotResponding)
Aug 3 10:03:35 makrolon Dock[317]: -[UABestAppSuggestionManager notifyBestAppChanged:type:options:bundleIdentifier:activityType:dynamicIdentifier:when:confidence:deviceName:deviceIdentifier:deviceType:] (null) UASuggestedActionType=0 (null)/(null) opts=(null) when=2016-08-03 02:03:35 +0000 confidence=1 from=(null)/(null) (UABestAppSuggestionManager.m #319)
Aug 3 10:03:35 makrolon networkd[174]: -[NETClientConnection effectiveBundleID] using process name apsd as bundle ID (this is expected for daemons without bundle ID
Aug 3 10:03:35 --- last message repeated 1 time ---
Aug 3 10:03:35 makrolon cfprefsd[124]: BUG in libdispatch: 15G31 - 1718 - 0x0
Aug 3 10:03:35 makrolon kernel[0]: en1: channel changed to 1
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][DeviceRequestCompleteHandler] -- Received 0xE00002ED (kIOReturnNotResponding) -- 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: **** [IOBluetoothHostControllerUSBTransport][DoDeviceReset] -- Re-Enumeration is currently not permitted -- this = 0x8800 ****
Aug 3 10:03:35 makrolon kernel[0]: BrcmPatchRAM2: Version 2.2.7 starting on OS X Darwin 15.6.
Aug 3 10:03:35 makrolon kernel[0]: BrcmPatchRAM2: [0a5c:216f]: USB [184F32F21470 v274] "BCM20702A0" by "Broadcom Corp"
Aug 3 10:03:35 makrolon blued[84]: Host controller terminated
Aug 3 10:03:35 makrolon com.apple.lakitu[509]: Checking iCDP status for DSID 128632347 (checkWithServer=0)