Thanks OP for the guide. It got me through the process of installing, and now I'm trying to get it running well. My system:
GA-X79-UP4
Intel Core i7-4960X
GeForce GTX 760
32GB 1600MHz DDR3
Mavericks install was on a Samsung MZ-7TE500BW 500GB SSD and I have a 2TB storage drive. Everything is off the March Buyer's guide for CustoMac Pro Socket 2011.
I followed the guide step-by-step, including the same options in Multibeast. I also copied FileNVRAM.dylib and made the boot changes reported in egotrippin's post above. The USB boot up was very long, somewhere on the order of 10-15 minutes, and the mouse/video animations were choppy during install.
The system will reliably boot without options now, but like many others I'm experiencing choppy mouse and animations booting off the SSD. It's not that the whole system is running slowly, because things that don't animate happen instantly. Everything else is a slow process where I can see the animation happen almost step-by-step.
I've read through pages and pages of this problem. Many of them are the same person reporting their problem on multiple threads
I found the one suggesting AutoCAD 2013 could somehow fix it, but it didn't for me. I don't want to go too far down the path of trying random fixes because I might mess things up worse than they are.
My biggest problem is not knowing how to troubleshoot. First instinct is video, but the system reports the right card so I'm assuming those drivers are good. RAM also seems to be fine and memory sticks are in the right slots (I also tried 2 sticks--no luck). I can't imagine it's the SSD that's slow, although start up and shutdown times are much slower than I expected on SSD. EDIT: The clock also runs slowly, possibly pointing at a culprit. I auto set it at least 3 times last night, and this morning it's 9 minutes slow!
Another data point: in my first failed install, which I wound up reformatting, I initially had choppy performance but then it was magically normal. Then I proceeded to bork the system so I don't know what (if anything) I did to make it smooth the first time.
Can anyone shed some light on this and help me get a good build? Thanks.